BMS.Assembly Class¶

The BMS.Assembly class is used as container for storing basic, textual information about a DNA assembly. It has no associated methods and is simply used to allow for standardised storage of a DNA assembly across BiomationScripter.

Creating the Assembly¶

First, the BMS generic tools module is imported as BMS

In [1]:

import BiomationScripter as BMS

import BiomationScripter as BMS

Next, the initial information is defined

In [2]:

Assembly_Name = "GFP Expression Unit"
Backbone = "pOdd1"
Parts = ["J23100", "B0034", "GFP", "B0015"]

Assembly_Name = "GFP Expression Unit" Backbone = "pOdd1" Parts = ["J23100", "B0034", "GFP", "B0015"]

Then, the Assembly object can be created

In [3]:

GFP_Expression_Assembly = BMS.Assembly(
    Name = Assembly_Name,
    Backbone = Backbone,
    Parts = Parts
)

GFP_Expression_Assembly = BMS.Assembly( Name = Assembly_Name, Backbone = Backbone, Parts = Parts )

Information can be retrieved using the three attributes

In [4]:

GFP_Expression_Assembly.name

GFP_Expression_Assembly.name

Out[4]:

'GFP Expression Unit'

In [5]:

GFP_Expression_Assembly.backbone

GFP_Expression_Assembly.backbone

Out[5]:

'pOdd1'

In [6]:

GFP_Expression_Assembly.parts

GFP_Expression_Assembly.parts

Out[6]:

['J23100', 'B0034', 'GFP', 'B0015']

In [ ]: